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    UCH3 ubiquitin C-terminal hydrolase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827466, updated on 18-Sep-2024

    Summary

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    Official Symbol
    UCH3
    Official Full Name
    ubiquitin C-terminal hydrolase 3
    Primary source
    TAIR:AT4G17510
    Locus tag
    AT4G17510
    See related
    Araport:AT4G17510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL4790C; FCAALL.31; ubiquitin C-terminal hydrolase 3; UBIQUITIN C-TERMINAL HYDROLASE 3
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    Genomic context

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    See UCH3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (9766894..9768831, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene carboxyl-terminal proteinase-like protein (DUF239) Neighboring gene miscRNA Neighboring gene Hyaluronan / mRNA binding family Neighboring gene RAB GTPase homolog 1C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ubiquitin carboxyl-terminal hydrolases are required for period maintenance of the circadian clock at high temperature in Arabidopsis. Hayama R, et al. Sci Rep, 2019 Nov 19. PMID 31745110, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Ubiquitin carboxyl-terminal hydrolases are required for period maintenance of the circadian clock at high temperature in Arabidopsis.
      Title: Ubiquitin carboxyl-terminal hydrolases are required for period maintenance of the circadian clock at high temperature in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_117857.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ubiquitin C-terminal hydrolase 3
    NP_193484.1
    • ubiquitin C-terminal hydrolase 3 (UCH3); FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1294 Blast hits to 1288 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 359; Plants - 155; Viruses - 0; Other Eukaryotes - 156 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9766894..9768831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117857.3 → NP_193484.1  ubiquitin C-terminal hydrolase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193484.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23592, Q8GWE1
      UniProtKB/TrEMBL
      A0A178V2F1, A0A5S9XTP9, A0A654FQE3
      Conserved Domains (1) summary
      cd09616
      Location:13 → 230
      Peptidase_C12_UCH_L1_L3; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GWE1.1

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