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    ILL3 IAA-leucine-resistant (ILR1)-like 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835501, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ILL3
    Official Full Name
    IAA-leucine-resistant (ILR1)-like 3
    Primary source
    TAIR:AT5G54140
    Locus tag
    AT5G54140
    See related
    Araport:AT5G54140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    IAA-leucine-resistant (ILR1)-like 3; MJP23.12; MJP23_12
    Summary
    encodes a protein similar to IAA amino acid conjugate hydrolase
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    Genomic context

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    See ILL3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (21965667..21968061)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene membrane-associated mannitol-induced Neighboring gene Calcium-binding endonuclease/exonuclease/phosphatase family Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. IAR3 encodes an auxin conjugate hydrolase from Arabidopsis. Davies RT, et al. Plant Cell, 1999 Mar. PMID 10072397, Free PMC Article
    2. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_124794.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables IAA-amino acid conjugate hydrolase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within auxin metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    IAA-leucine-resistant (ILR1)-like 3
    NP_200225.1
    • IAA-leucine-resistant (ILR1)-like 3 (ILL3); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21965667..21968061
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124794.3 → NP_200225.1  IAA-leucine-resistant (ILR1)-like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200225.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81641
      UniProtKB/TrEMBL
      A0A654GBC1
      Conserved Domains (2) summary
      cd08017
      Location:41 → 418
      M20_IAA_Hyd; M20 Peptidase Indole-3-acetic acid amino acid hydrolase
      COG1473
      Location:31 → 418
      AbgB; Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O81641.1

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