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    LOC105372637 uncharacterized LOC105372637 [ Homo sapiens (human) ]

    Gene ID: 105372637, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC105372637
    Gene description
    uncharacterized LOC105372637
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.0) See more
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    Genomic context

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    See LOC105372637 in Genome Data Viewer
    Location:
    20q13.13
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (47950810..47961243)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (49719098..49729532)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene RNA, 5S ribosomal pseudogene 486 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:46523130-46524066 Neighboring gene RNA, U7 small nuclear 92 pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:46579981-46580540 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:46581153-46581653 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:46598923-46599424 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:46599425-46599924 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12982 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr20:46607945-46608919 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:46611853-46612352 Neighboring gene long intergenic non-protein coding RNA 1522 Neighboring gene uncharacterized LOC107985436 Neighboring gene long intergenic non-protein coding RNA 1523 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:46621816-46622316 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18011 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18012 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:46634734-46635234 Neighboring gene uncharacterized LOC107985437 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:46648566-46649066 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:46649067-46649567

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      47950810..47961243
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_936788.2 RNA Sequence

    2. XR_936787.2 RNA Sequence

    3. XR_936789.2 RNA Sequence

    4. XR_936793.2 RNA Sequence

    5. XR_936790.2 RNA Sequence

    6. XR_936795.4 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      49719098..49729532
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007089686.1 RNA Sequence

    2. XR_007089684.1 RNA Sequence

    3. XR_007089689.1 RNA Sequence

    4. XR_007089690.1 RNA Sequence

    5. XR_007089688.1 RNA Sequence

    6. XR_007089687.1 RNA Sequence

    7. XR_007089685.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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