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    RLP9 receptor like protein 9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842186, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLP9
    Official Full Name
    receptor like protein 9
    Primary source
    TAIR:AT1G58190
    Locus tag
    AT1G58190
    See related
    Araport:AT1G58190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP9; receptor like protein 9; T18I24.10; T18I24_10
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    Genomic context

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    See RLP9 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (21540584..21548119)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Disease resistance-responsive (dirigent-like protein) family protein Neighboring gene beta carbonic anhydrase 6 Neighboring gene MSCS-like 3 Neighboring gene EMBRYO DEFECTIVE protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001198331.1
    NM_001333819.1
    NM_001333820.1
    NM_104600.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor like protein 9
    NP_001185260.1
    • receptor like protein 9 (RLP9); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 13 (TAIR:AT1G74170.1).
    NP_176115.2
    • receptor like protein 9 (RLP9); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 56 (TAIR:AT5G49290.1); Has 228906 Blast hits to 34132 proteins in 1230 species: Archae - 113; Bacteria - 14890; Metazoa - 57611; Fungi - 2795; Plants - 136156; Viruses - 105; Other Eukaryotes - 17236 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21540584..21548119
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104600.3 → NP_176115.2  receptor like protein 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176115.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I9S2, F4I9S3, Q8GZ49, Q9C6F4, Q9C6R1
      UniProtKB/TrEMBL
      A0A178WNA7
      Conserved Domains (4) summary
      sd00033
      Location:201 → 225
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:324 → 383
      LRR_8; Leucine rich repeat
      cl26161
      Location:100 → 284
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      cl26793
      Location:382 → 869
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

    2. NM_001198331.1 → NP_001185260.1  receptor like protein 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185260.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WQS9
      Conserved Domains (5) summary
      COG4886
      Location:120 → 333
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00116
      Location:170 → 383
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:494 → 518
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:32 → 68
      LRRNT_2; Leucine rich repeat N-terminal domain
      pfam13855
      Location:847 → 902
      LRR_8; Leucine rich repeat

    3. NM_001333819.1 → NP_001322351.1  receptor like protein 9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A1P8ATR9
      UniProtKB/TrEMBL
      A0A178W8Q9
      Conserved Domains (3) summary
      sd00033
      Location:189 → 211
      LRR_RI; leucine-rich repeat [structural motif]
      cl26161
      Location:111 → 294
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      cl26793
      Location:333 → 864
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional

    4. NM_001333820.1 → NP_001322352.1  receptor like protein 9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W8Q9, A0A1P8ATQ6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A1P8ATR9.1
    F4I9S3.1

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