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    IAA1 indole-3-acetic acid inducible [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827103, updated on 18-Sep-2024

    Summary

    Official Symbol
    IAA1
    Official Full Name
    indole-3-acetic acid inducible
    Primary source
    TAIR:AT4G14560
    Locus tag
    AT4G14560
    See related
    Araport:AT4G14560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AUX/IAA PROTEIN 1; AUXIN RESISTANT 5; AXR5; DL3320W; FCAALL.409; indole-3-acetic acid inducible; indole-3-acetic acid inducible 1
    Summary
    auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein.
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    Genomic context

    See IAA1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (8360996..8362033)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene indole-3-acetic acid inducible 14 Neighboring gene ncRNA Neighboring gene acylaminoacyl-peptidase-like protein Neighboring gene CBL-interacting protein kinase 4

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_117536.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within response to auxin IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    indole-3-acetic acid inducible
    NP_193192.1
    • indole-3-acetic acid inducible (IAA1); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid inducible 2 (TAIR:AT3G23030.1); Has 1898 Blast hits to 1895 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 1895; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8360996..8362033
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117536.4NP_193192.1  indole-3-acetic acid inducible [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193192.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23312, P49677
      UniProtKB/TrEMBL
      D3K0A6, Q67YC2
      Conserved Domains (1) summary
      pfam02309
      Location:12164
      AUX_IAA; AUX/IAA family