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    GPAT6 glycerol-3-phosphate acyltransferase 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818389, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GPAT6
    Official Full Name
    glycerol-3-phosphate acyltransferase 6
    Primary source
    TAIR:AT2G38110
    Locus tag
    AT2G38110
    See related
    Araport:AT2G38110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGPAT6; F16M14.4; F16M14_4; glycerol-3-phosphate acyltransferase 6; GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6; GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6
    Summary
    bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly.
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    Genomic context

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    See GPAT6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (15952496..15955752, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Duplicated homeodomain-like superfamily protein Neighboring gene proton-dependent oligopeptide transport (POT) family protein Neighboring gene ncRNA Neighboring gene Transmembrane amino acid transporter family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Glycerol-3-phosphate acyltransferase 6 (GPAT6) is important for tapetum development in Arabidopsis and plays multiple roles in plant fertility. Li XC, et al. Mol Plant, 2012 Jan. PMID 21746699
    2. Nanoridges that characterize the surface morphology of flowers require the synthesis of cutin polyester. Li-Beisson Y, et al. Proc Natl Acad Sci U S A, 2009 Dec 22. PMID 19959665, Free PMC Article
    3. A land-plant-specific glycerol-3-phosphate acyltransferase family in Arabidopsis: substrate specificity, sn-2 preference, and evolution. Yang W, et al. Plant Physiol, 2012 Oct. PMID 22864585, Free PMC Article
    4. A user-friendly platform for yeast two-hybrid library screening using next generation sequencing. Erffelinck ML, et al. PLoS One, 2018. PMID 30576311, Free PMC Article
    5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. GPAT6 is important for tapetum development and plays multiple roles in plant fertility.
      Title: Glycerol-3-phosphate acyltransferase 6 (GPAT6) is important for tapetum development in Arabidopsis and plays multiple roles in plant fertility.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_129367.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycerol-3-phosphate 2-O-acyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cutin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within flower development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glycerol-3-phosphate acyltransferase 6
    NP_181346.1
    • glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15952496..15955752 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129367.4 → NP_181346.1  glycerol-3-phosphate acyltransferase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181346.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80437
      UniProtKB/TrEMBL
      A0A5S9X543
      Conserved Domains (3) summary
      cd06551
      Location:308 → 467
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis
      PLN02177
      Location:3 → 501
      PLN02177; glycerol-3-phosphate acyltransferase
      pfam12710
      Location:29 → 208
      HAD; haloacid dehalogenase-like hydrolase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80437.1

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