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    DNAse I-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819415, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DNAse I-like superfamily protein
    Primary source
    TAIR:AT2G48030
    Locus tag
    AT2G48030
    See related
    Araport:AT2G48030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J23.18
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (19647523..19650313, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene receptor-like kinase in in flowers 3 Neighboring gene Major facilitator superfamily protein Neighboring gene piezo-type mechanosensitive ion channel component Neighboring gene uncharacterized protein Neighboring gene resistance to phytophthora 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_130370.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNAse I-like superfamily protein
    NP_566121.1
    • DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G21530.1); Has 404 Blast hits to 404 proteins in 167 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19647523..19650313 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337289.1 → NP_001325107.1  DNAse I-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B282

    2. NM_130370.4 → NP_566121.1  DNAse I-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566121.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXZ5, A0A7G2EEV7, Q9ZU86
      Conserved Domains (1) summary
      cl00490
      Location:159 → 289
      EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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