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    WRKY3 WRKY DNA-binding protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814863, updated on 18-Sep-2024

    Summary

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    Official Symbol
    WRKY3
    Official Full Name
    WRKY DNA-binding protein 3
    Primary source
    TAIR:AT2G03340
    Locus tag
    AT2G03340
    See related
    Araport:AT2G03340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T4M8.23; T4M8_23; WRKY DNA-binding protein 3
    Summary
    Encodes WRKY DNA-binding protein 3 (WRKY3).
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    Genomic context

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    See WRKY3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (1014350..1017222, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene DUF538 family protein (Protein of unknown function, DUF538) Neighboring gene Glycosyltransferase family 61 protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CRISPR/Cas9-mediated mutagenesis of WRKY3 and WRKY4 function decreases salt and Me-JA stress tolerance in Arabidopsis thaliana. Li P, et al. Mol Biol Rep, 2021 Aug. PMID 34351541
    2. Roles of Arabidopsis WRKY3 and WRKY4 transcription factors in plant responses to pathogens. Lai Z, et al. BMC Plant Biol, 2008 Jun 20. PMID 18570649, Free PMC Article
    3. Proteomic analyses identify a diverse array of nuclear processes affected by small ubiquitin-like modifier conjugation in Arabidopsis. Miller MJ, et al. Proc Natl Acad Sci U S A, 2010 Sep 21. PMID 20813957, Free PMC Article
    4. The WRKY superfamily of plant transcription factors. Eulgem T, et al. Trends Plant Sci, 2000 May. PMID 10785665
    5. An Arabidopsis gene regulatory network for secondary cell wall synthesis. Taylor-Teeples M, et al. Nature, 2015 Jan 29. PMID 25533953, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. CRISPR/Cas9-mediated mutagenesis of WRKY3 and WRKY4 function decreases salt and Me-JA stress tolerance in Arabidopsis thaliana.
      Title: CRISPR/Cas9-mediated mutagenesis of WRKY3 and WRKY4 function decreases salt and Me-JA stress tolerance in Arabidopsis thaliana.
    2. Data support that WRKY3 function as transcription factors and have a positive role in plant resistance to necrotrophic pathogens.
      Title: Roles of Arabidopsis WRKY3 and WRKY4 transcription factors in plant responses to pathogens.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_126385.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    WRKY DNA-binding protein 3
    NP_178433.1
    • WRKY DNA-binding protein 3 (WRKY3); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 4 (TAIR:AT1G13960.1); Has 6486 Blast hits to 3819 proteins in 292 species: Archae - 2; Bacteria - 20; Metazoa - 337; Fungi - 90; Plants - 5675; Viruses - 3; Other Eukaryotes - 359 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      1014350..1017222 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126385.4 → NP_178433.1  WRKY DNA-binding protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178433.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZQ70
      UniProtKB/TrEMBL
      A0A7G2E9J4, Q0WPM8
      Conserved Domains (1) summary
      smart00774
      Location:414 → 471
      WRKY; DNA binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZQ70.1

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