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    Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843051, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain
    Primary source
    TAIR:AT1G67310
    Locus tag
    AT1G67310
    See related
    Araport:AT1G67310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1N21.13
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (25198182..25203126, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene glyoxal oxidase-related protein Neighboring gene Major facilitator superfamily protein Neighboring gene DNA primase, large subunit family Neighboring gene Ran BP2/NZF zinc finger-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana. Jones AM, et al. J Proteomics, 2009 Apr 13. PMID 19245862
    2. A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants. Yang T, et al. J Biol Chem, 2002 Nov 22. PMID 12218065
    3. 14-3-3 proteins fine-tune plant nutrient metabolism. Shin R, et al. FEBS Lett, 2011 Jan 3. PMID 21094157
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_105399.2

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain
    NP_176899.2
    • Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Cell surface receptor IPT/TIG (InterPro:IPR002909), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: signal responsive 1 (TAIR:AT2G22300.2); Has 4214 Blast hits to 2978 proteins in 268 species: Archae - 9; Bacteria - 179; Metazoa - 1855; Fungi - 220; Plants - 413; Viruses - 4; Other Eukaryotes - 1534 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25198182..25203126 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105399.2 → NP_176899.2  Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176899.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FYG2
      UniProtKB/TrEMBL
      A0A178WML9, A0A654ENF8
      Conserved Domains (5) summary
      smart00015
      Location:877 → 899
      IQ; Calmodulin-binding motif
      sd00045
      Location:680 → 717
      ANK; ANK repeat [structural motif]
      pfam01833
      Location:447 → 530
      TIG; IPT/TIG domain
      pfam03859
      Location:45 → 157
      CG-1; CG-1 domain
      pfam12796
      Location:652 → 739
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FYG2.1

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