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    phosphoribosylformylglycinamidine synthase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839628, updated on 18-Sep-2024

    Summary

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    Official Full Name
    phosphoribosylformylglycinamidine synthase
    Primary source
    TAIR:AT1G27385
    Locus tag
    AT1G27385
    See related
    Araport:AT1G27385
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (9510475..9512971, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene squamosa promoter binding protein-like 10 Neighboring gene ROP-interactive CRIB motif-containing protein 2 Neighboring gene translocase outer membrane 20-2 Neighboring gene Ribosomal protein L22p/L17e family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001084137.1
    NM_001160901.2
    NM_001160902.1
    NM_102501.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    phosphoribosylformylglycinamidine synthase
    NP_001077606.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_001154373.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 77 Blast hits to 77 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_001154374.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 79 Blast hits to 79 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_564282.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF493 (InterPro:IPR007454); Has 76 Blast hits to 76 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9510475..9512971 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001160901.2 → NP_001154373.1  phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154373.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HSW1, Q0WQS3
      Conserved Domains (1) summary
      pfam04359
      Location:120 → 201
      DUF493; Protein of unknown function (DUF493)

    2. NM_001160902.1 → NP_001154374.1  phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154374.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HSW0
      Conserved Domains (1) summary
      pfam04359
      Location:119 → 200
      DUF493; Protein of unknown function (DUF493)

    3. NM_102501.3 → NP_564282.1  phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564282.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0WQS3, Q9FZJ7
      Conserved Domains (1) summary
      pfam04359
      Location:119 → 202
      DUF493; Protein of unknown function (DUF493)

    4. NM_001084137.1 → NP_001077606.1  phosphoribosylformylglycinamidine synthase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077606.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MQS1, Q0WQS3
      Conserved Domains (1) summary
      pfam04359
      Location:119 → 200
      DUF493; Protein of unknown function (DUF493)
    Nucleotide Protein
    Heading Accession and Version

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