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    CYP71B28 cytochrome P450, family 71, subfamily B, polypeptide 28 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837866, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP71B28
    Official Full Name
    cytochrome P450, family 71, subfamily B, polypeptide 28
    Primary source
    TAIR:AT1G13090
    Locus tag
    AT1G13090
    See related
    Araport:AT1G13090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; F3F19.11; F3F19_11; family 71; polypeptide 28; polypeptide 28''; subfamily B
    Summary
    putative cytochrome P450
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    Genomic context

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    See CYP71B28 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (4461738..4463469)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene cytochrome P450, family 71, subfamily B, polypeptide 2 Neighboring gene cytochrome P450, family 71, subfamily B, polypeptide 29 Neighboring gene cytochrome P450, family 71 subfamily B, polypeptide 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001332062.1
    NM_101179.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region HDA PubMed 

    General protein information

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    Preferred Names
    cytochrome P450, family 71, subfamily B, polypeptide 28
    NP_001318992.1
    • ''cytochrome P450, family 71, subfamily B, polypeptide 28'' (CYP71B28); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G26830.1); Has 32313 Blast hits to 32069 proteins in 1664 species: Archae - 46; Bacteria - 2999; Metazoa - 11820; Fungi - 6857; Plants - 9495; Viruses - 0; Other Eukaryotes - 1096 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4461738..4463469
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332062.1 → NP_001318992.1  cytochrome P450, family 71, subfamily B, polypeptide 28 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2H1ZEB5

    2. NM_101179.3 → NP_172768.1  cytochrome P450, family 71, subfamily B, polypeptide 28 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172768.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SAE3
      UniProtKB/TrEMBL
      A0A178WA16, A0A5S9U6I1, A0A654E9G8, Q8LB43
      Conserved Domains (1) summary
      cd11072
      Location:58 → 474
      CYP71-like; cytochrome P450 family 71 and similar cytochrome P450s
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SAE3.1

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