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    LPAT4 lysophosphatidyl acyltransferase 4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843840, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LPAT4
    Official Full Name
    lysophosphatidyl acyltransferase 4
    Primary source
    TAIR:AT1G75020
    Locus tag
    AT1G75020
    See related
    Araport:AT1G75020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F25A4.2; F25A4_2; lysophosphatidyl acyltransferase 4
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    Genomic context

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    See LPAT4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (28170752..28173678)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GNS1/SUR4 membrane protein family Neighboring gene GTP binding protein Neighboring gene thaumatin-like protein 3 Neighboring gene pathogenesis-related protein 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. LYSOPHOSPHATIDIC ACID ACYLTRANSFERASES 4 and 5 are involved in glycerolipid metabolism and nitrogen starvation response in Arabidopsis. Angkawijaya AE, et al. New Phytol, 2019 Oct. PMID 31211859
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. LPAT4 and LPAT5 may redundantly function in endoplasmic-reticulum-localized de novo glycerolipid biosynthesis for phospholipids and triacylglycerol.
      Title: LYSOPHOSPHATIDIC ACID ACYLTRANSFERASES 4 and 5 are involved in glycerolipid metabolism and nitrogen starvation response in Arabidopsis.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_106159.3
    NM_202415.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in CDP-diacylglycerol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    lysophosphatidyl acyltransferase 4
    NP_565098.1
    • lysophosphatidyl acyltransferase 4 (LPAT4); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 5 (TAIR:AT3G18850.4); Has 2097 Blast hits to 2094 proteins in 638 species: Archae - 0; Bacteria - 957; Metazoa - 532; Fungi - 179; Plants - 135; Viruses - 4; Other Eukaryotes - 290 (source: NCBI BLink).
    NP_974144.1
    • lysophosphatidyl acyltransferase 4 (LPAT4); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 5 (TAIR:AT3G18850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28170752..28173678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202415.2 → NP_974144.1  lysophosphatidyl acyltransferase 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974144.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L4Y2, Q9C9P8, Q9SSH0
      UniProtKB/TrEMBL
      A0A178WH06, A0A5S9WUI0, A0A654EP47
      Conserved Domains (1) summary
      PLN02510
      Location:7 → 378
      PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase

    2. NM_106159.3 → NP_565098.1  lysophosphatidyl acyltransferase 4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565098.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L4Y2, Q9C9P8, Q9SSH0
      UniProtKB/TrEMBL
      A0A178WH06, A0A5S9WUI0, A0A654EP47
      Conserved Domains (1) summary
      PLN02510
      Location:7 → 378
      PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L4Y2.1

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