U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    IQD7 IQ-domain 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838321, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    IQD7
    Official Full Name
    IQ-domain 7
    Primary source
    TAIR:AT1G17480
    Locus tag
    AT1G17480
    See related
    Araport:AT1G17480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28G4.3; F28G4_3; IQ-domain 7
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See IQD7 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (6006413..6008501, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene TRF-like 3 Neighboring gene developmentally regulated G-protein 1 Neighboring gene epidermal patterning factor-like protein Neighboring gene pseudo Neighboring gene ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. IQ67 DOMAIN proteins facilitate preprophase band formation and division-plane orientation. Kumari P, et al. Nat Plants, 2021 Jun. PMID 34031540
    2. Identification of Feronia-interacting proteins in Arabidopsis thaliana. Choi JH, et al. Genes Genomics, 2022 Dec. PMID 36053485
    3. The IQD Family of Calmodulin-Binding Proteins Links Calcium Signaling to Microtubules, Membrane Subdomains, and the Nucleus. Bürstenbinder K, et al. Plant Physiol, 2017 Mar. PMID 28115582, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_101610.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cytokinesis, division site positioning IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    colocalizes_with microtubule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    colocalizes_with nuclear envelope IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in phragmoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in preprophase band IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    IQ-domain 7
    NP_173191.2
    • IQ-domain 7 (IQD7); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 8 (TAIR:AT1G72670.1); Has 807 Blast hits to 806 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 22; Fungi - 5; Plants - 778; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6006413..6008501 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101610.3 → NP_173191.2  IQ-domain 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173191.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2NND9, Q9LNQ7, Q9LQK1
      UniProtKB/TrEMBL
      A0A178WK26, A0A5S9UWU9
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2NND9.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools