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    CM3 chorismate mutase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843269, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CM3
    Official Full Name
    chorismate mutase 3
    Primary source
    TAIR:AT1G69370
    Locus tag
    AT1G69370
    See related
    Araport:AT1G69370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtCM3; chorismate mutase 3; cm-3; F10D13.6; F10D13_6
    Summary
    Encodes chorismate mutase 3 (CM3).
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    Genomic context

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    See CM3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (26079956..26081727)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene T-box transcription factor, putative (DUF863) Neighboring gene sporulation protein (DUF155) Neighboring gene homologue of bacterial MinE 1 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene eukaryotic elongation factor 5A-3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cytosolic and plastidic chorismate mutase isozymes from Arabidopsis thaliana: molecular characterization and enzymatic properties. Eberhard J, et al. Plant J, 1996 Nov. PMID 8953244
    2. Structural evolution of differential amino acid effector regulation in plant chorismate mutases. Westfall CS, et al. J Biol Chem, 2014 Oct 10. PMID 25160622, Free PMC Article
    3. Identification, characterization and comparative analysis of a novel chorismate mutase gene in Arabidopsis thaliana. Mobley EM, et al. Gene, 1999 Nov 15. PMID 10564818
    4. Cloning and expression in yeast of a higher plant chorismate mutase. Molecular cloning, sequencing of the cDNA and characterization of the Arabidopsis thaliana enzyme expressed in yeast. Eberhard J, et al. FEBS Lett, 1993 Nov 15. PMID 8224252
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Structural evolution of differential amino acid effector regulation was found in 3 chorismate mutase isoforms.
      Title: Structural evolution of differential amino acid effector regulation in plant chorismate mutases.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    NM_105604.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables chorismate mutase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables chorismate mutase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in aromatic amino acid family biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within aromatic amino acid family biosynthetic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in chorismate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within defense response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in prephenate(2-) biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within tryptophan biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chorismate mutase 3
    NP_177096.1
    • chorismate mutase 3 (CM3); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 1 (TAIR:AT3G29200.1); Has 280 Blast hits to 280 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 142; Plants - 120; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26079956..26081727
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105604.2 → NP_177096.1  chorismate mutase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177096.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C544, Q9XF60
      UniProtKB/TrEMBL
      A0A178WB66, A0A5S9WSS7, A0A654EME4
      Conserved Domains (1) summary
      PLN02344
      Location:34 → 316
      PLN02344; chorismate mutase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C544.1

    Gene LinkOut

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