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    zinc finger CONSTANS-like protein (DUF3537) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843078, updated on 18-Sep-2024

    Summary

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    Official Full Name
    zinc finger CONSTANS-like protein (DUF3537)
    Primary source
    TAIR:AT1G67570
    Locus tag
    AT1G67570
    See related
    Araport:AT1G67570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12B7.12; F12B7_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (25325138..25327286)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene urease Neighboring gene PLAT/LH2 domain-containing lipoxygenase family protein Neighboring gene Protein kinase superfamily protein Neighboring gene Remorin family protein Neighboring gene Acid phosphatase/vanadium-dependent haloperoxidase-related protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334316.1
    NM_105424.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger CONSTANS-like protein (DUF3537)
    NP_564899.1
    • Protein of unknown function (DUF3537); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT3G20300.1); Has 140 Blast hits to 140 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25325138..25327286
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105424.5 → NP_564899.1  zinc finger CONSTANS-like protein (DUF3537) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564899.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WCI4, A0A7G2E0T9, F4HTN4, Q8LG29
      Conserved Domains (1) summary
      pfam12056
      Location:50 → 438
      DUF3537; Protein of unknown function (DUF3537)

    2. NM_001334316.1 → NP_001322354.1  zinc finger CONSTANS-like protein (DUF3537) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATQ7, A0A5S9WSG5, A0A654ELU1
      Conserved Domains (1) summary
      pfam12056
      Location:50 → 409
      DUF3537; Protein of unknown function (DUF3537)
    Nucleotide Protein
    Heading Accession and Version

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