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    SCPL49 SERINE CARBOXYPEPTIDASE-LIKE 49 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820205, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SCPL49
    Official Full Name
    SERINE CARBOXYPEPTIDASE-LIKE 49
    Primary source
    TAIR:AT3G10410
    Locus tag
    AT3G10410
    See related
    Araport:AT3G10410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CARBOXYPEPTIDASE Y; CPY; SERINE CARBOXYPEPTIDASE-LIKE 49
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    Genomic context

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    See SCPL49 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (3235290..3238267, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene protein FLOWERING locus D-like protein Neighboring gene RNA recognition motif and CCHC-type zinc finger domains containing protein Neighboring gene vacuolar acid trehalase Neighboring gene tRNA-Tyr Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A vacuolar carboxypeptidase mutant of Arabidopsis thaliana is degraded by the ERAD pathway independently of its N-glycan. Yamamoto M, et al. Biochem Biophys Res Commun, 2010 Mar 12. PMID 20138839
    2. Proximity labeling of protein complexes and cell-type-specific organellar proteomes in Arabidopsis enabled by TurboID. Mair A, et al. Elife, 2019 Sep 19. PMID 31535972, Free PMC Article
    3. Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. Shimaoka T, et al. Plant Cell Physiol, 2004 Jun. PMID 15215502
    4. Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. Van Leene J, et al. Nat Plants, 2019 Mar. PMID 30833711
    5. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_111876.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole HDA PubMed 
    located_in vacuole HDA PubMed 
    located_in vacuole IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SERINE CARBOXYPEPTIDASE-LIKE 49
    NP_187652.1
    • SERINE CARBOXYPEPTIDASE-LIKE 49 (SCPL49); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 3569 Blast hits to 3439 proteins in 342 species: Archae - 0; Bacteria - 147; Metazoa - 678; Fungi - 883; Plants - 1454; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3235290..3238267 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111876.5 → NP_187652.1  SERINE CARBOXYPEPTIDASE-LIKE 49 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187652.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P32826, Q42107, Q9CAE5
      UniProtKB/TrEMBL
      A0A178VKH6, A0A5S9XB24, A0A7G2EKP8
      Conserved Domains (1) summary
      pfam00450
      Location:90 → 494
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P32826.2

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