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    Sec1/munc18-like (SM) proteins superfamily [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829302, updated on 18-Sep-2024

    Summary

    Official Full Name
    Sec1/munc18-like (SM) proteins superfamily
    Primary source
    TAIR:AT4G31740
    Locus tag
    AT4G31740
    See related
    Araport:AT4G31740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28M20.70; F28M20_70
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (15363778..15364349)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene glutamine dumper 1 Neighboring gene HOPW1-1-interacting 2 Neighboring gene peroxidase superfamily protein Neighboring gene debranching enzyme 1

    General gene information

    NM_119323.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    Sec1/munc18-like (SM) proteins superfamily
    NP_194902.1
    • Sec1/munc18-like (SM) proteins superfamily; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); BEST Arabidopsis thaliana protein match is: Sec1/munc18-like (SM) proteins superfamily (TAIR:AT2G17980.1); Has 391 Blast hits to 391 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 139; Plants - 66; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15363778..15364349
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119323.1NP_194902.1  Sec1/munc18-like (SM) proteins superfamily [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194902.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXX3, A0A654FUN8, O81774
      Conserved Domains (1) summary
      cl15415
      Location:1154
      Sec1; Sec1 family