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    NRT2.7 high affinity nitrate transporter 2.7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831308, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NRT2.7
    Official Full Name
    high affinity nitrate transporter 2.7
    Primary source
    TAIR:AT5G14570
    Locus tag
    AT5G14570
    See related
    Araport:AT5G14570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATNRT2.7; high affinity nitrate transporter 2.7; T15N1.60; T15N1_60
    Summary
    Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.
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    Genomic context

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    See NRT2.7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (4695084..4697078, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene polyribonucleotide nucleotidyltransferase Neighboring gene Isocitrate/isopropylmalate dehydrogenase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proanthocyanidin oxidation of Arabidopsis seeds is altered in mutant of the high-affinity nitrate transporter NRT2.7. David LC, et al. J Exp Bot, 2014 Mar. PMID 24532452, Free PMC Article
    2. The Arabidopsis ATNRT2.7 nitrate transporter controls nitrate content in seeds. Chopin F, et al. Plant Cell, 2007 May. PMID 17540716, Free PMC Article
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The results highlight a hitherto-unknown function of NRT2.7 in proantocyanidins (PAs) accumulation/oxidation.
      Title: Proanthocyanidin oxidation of Arabidopsis seeds is altered in mutant of the high-affinity nitrate transporter NRT2.7.
    2. These results demonstrate that ATNRT2.7 plays a specific role in nitrate accumulation in the seed.
      Title: The Arabidopsis ATNRT2.7 nitrate transporter controls nitrate content in seeds.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_121461.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nitrate transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables nitrate transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within nitrate transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    high affinity nitrate transporter 2.7
    NP_196961.1
    • high affinity nitrate transporter 2.7 (NRT2.7); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter2.5 (TAIR:AT1G12940.1); Has 7777 Blast hits to 7739 proteins in 1625 species: Archae - 132; Bacteria - 6743; Metazoa - 43; Fungi - 326; Plants - 261; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4695084..4697078 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121461.3 → NP_196961.1  high affinity nitrate transporter 2.7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196961.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LYK2
      UniProtKB/TrEMBL
      A0A178UKX9, A0A178UMM2, A0A5S9Y447
      Conserved Domains (1) summary
      PLN00028
      Location:5 → 493
      PLN00028; nitrate transmembrane transporter; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LYK2.1

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