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    SNRK2.5 SNF1-related protein kinase 2.5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836485, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SNRK2.5
    Official Full Name
    SNF1-related protein kinase 2.5
    Primary source
    TAIR:AT5G63650
    Locus tag
    AT5G63650
    See related
    Araport:AT5G63650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MBK5.13; MBK5_13; SNF1-related protein kinase 2.5; SNF1-RELATED PROTEIN KINASE 2H; SNRK2-5; SRK2H
    Summary
    encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.
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    Genomic context

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    See SNRK2.5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (25481334..25483799, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene ENTH/VHS/GAT family protein Neighboring gene Scorpion toxin-like knottin superfamily protein Neighboring gene SPT4 homolog 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis Protein Phosphatase PIA1 Impairs Plant Drought Tolerance by Serving as a Common Negative Regulator in ABA Signaling Pathway. Huang Y, et al. Plants (Basel), 2023 Jul 21. PMID 37514328, Free PMC Article
    2. Identification of nine sucrose nonfermenting 1-related protein kinases 2 activated by hyperosmotic and saline stresses in Arabidopsis thaliana. Boudsocq M, et al. J Biol Chem, 2004 Oct 1. PMID 15292193
    3. Arabidopsis decuple mutant reveals the importance of SnRK2 kinases in osmotic stress responses in vivo. Fujii H, et al. Proc Natl Acad Sci U S A, 2011 Jan 25. PMID 21220313, Free PMC Article
    4. Catalytic mechanism and kinase interactions of ABA-signaling PP2C phosphatases. Zhou XE, et al. Plant Signal Behav, 2012 May. PMID 22516825, Free PMC Article
    5. In Planta Determination of the mRNA-Binding Proteome of Arabidopsis Etiolated Seedlings. Reichel M, et al. Plant Cell, 2016 Oct. PMID 27729395, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_125760.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables mRNA binding HDA PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to osmotic stress IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to osmotic stress IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    SNF1-related protein kinase 2.5
    NP_201170.1
    • SNF1-related protein kinase 2.5 (SNRK2.5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: SNF1-related protein kinase 2.1 (TAIR:AT5G08590.1); Has 132292 Blast hits to 116481 proteins in 3406 species: Archae - 169; Bacteria - 13418; Metazoa - 52934; Fungi - 13701; Plants - 25794; Viruses - 1077; Other Eukaryotes - 25199 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25481334..25483799 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125760.2 → NP_201170.1  SNF1-related protein kinase 2.5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201170.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WT36, Q8LA99, Q9FFP9
      UniProtKB/TrEMBL
      A0A5S9YHE3, A0A654GDP2
      Conserved Domains (1) summary
      cd14662
      Location:3 → 259
      STKc_SnRK2; Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FFP9.1

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