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    heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832835, updated on 18-Sep-2024

    Summary

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    Official Full Name
    heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624)
    Primary source
    TAIR:AT5G27730
    Locus tag
    AT5G27730
    See related
    Araport:AT5G27730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1G16.60; T1G16_60
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    12
    Sequence:
    Chromosome: 5; NC_003076.8 (9819256..9823250)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ATPase family associated with various cellular activities (AAA) Neighboring gene F-box/FBD-like domains containing protein Neighboring gene Hypoxia-responsive family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001344034.1
    NM_001344035.1
    NM_001344036.1
    NM_122655.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624)
    NP_568500.1
    • Protein of unknown function (DUF1624); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1624 (InterPro:IPR012429); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1624) (TAIR:AT5G47900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      9819256..9823250
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344033.1 → NP_001332300.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGK3, A0A7G2FAL4
      Conserved Domains (1) summary
      cl21495
      Location:28 → 391
      Acyl_transf_3; Acyltransferase family

    2. NM_122655.4 → NP_568500.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568500.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y8V3, A0A7G2FAL4, Q94CC1
      Conserved Domains (1) summary
      cl21495
      Location:36 → 472
      Acyl_transf_3; Acyltransferase family

    3. NM_001344035.1 → NP_001332302.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGK8

    4. NM_001344034.1 → NP_001332299.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGI5
      Conserved Domains (1) summary
      cl21495
      Location:36 → 377
      Acyl_transf_3; Acyltransferase family

    5. NM_001344036.1 → NP_001332301.1  heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGK4
    Nucleotide Protein
    Heading Accession and Version

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