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    Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816820, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein
    Primary source
    TAIR:AT2G22890
    Locus tag
    AT2G22890
    See related
    Araport:AT2G22890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T20K9.10; T20K9_10
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (9742224..9743467, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene phytosulfokine 2 precursor Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene VQ motif-containing protein Neighboring gene Galactosyl transferase GMA12/MNN10 family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127854.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein
    NP_179874.1
    • Kua-ubiquitin conjugating enzyme hybrid localisation domain; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kua-ubiquitin conjugating enzyme hybrid, localisation (InterPro:IPR019547); BEST Arabidopsis thaliana protein match is: fatty acid desaturase A (TAIR:AT4G27030.1); Has 226 Blast hits to 226 proteins in 95 species: Archae - 0; Bacteria - 21; Metazoa - 120; Fungi - 0; Plants - 47; Viruses - 3; Other Eukaryotes - 35 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9742224..9743467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127854.3 → NP_179874.1  Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179874.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81006, Q6DR28
      UniProtKB/TrEMBL
      A0A178VZ91, A0A5S9X0G5
      Conserved Domains (1) summary
      pfam10520
      Location:105 → 273
      TMEM189_B_dmain; B domain of TMEM189, localization domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O81006.1

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