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    RAS1 RESPONSE TO ABA AND SALT 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837529, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RAS1
    Official Full Name
    RESPONSE TO ABA AND SALT 1
    Primary source
    TAIR:AT1G09950
    Locus tag
    AT1G09950
    See related
    Araport:AT1G09950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F21M12.34; F21M12_34; RESPONSE TO ABA AND SALT 1
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    Genomic context

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    See RAS1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (3240531..3241863, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Phosphoglycerate mutase family protein Neighboring gene Glutamyl-tRNA reductase family protein Neighboring gene sucrose transporter 4 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RAS1, a quantitative trait locus for salt tolerance and ABA sensitivity in Arabidopsis. Ren Z, et al. Proc Natl Acad Sci U S A, 2010 Mar 23. PMID 20212128, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_100869.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in negative regulation of abscisic acid-activated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in negative regulation of cellular hyperosmotic salinity response IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to salt stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RESPONSE TO ABA AND SALT 1
    NP_172466.1
    • RESPONSE TO ABA AND SALT 1 (RAS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, root, flower, leaf; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT1G58330.1); Has 520 Blast hits to 520 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 520; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3240531..3241863 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100869.4 → NP_172466.1  RESPONSE TO ABA AND SALT 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172466.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04515
      UniProtKB/TrEMBL
      A0A178WG23
      Conserved Domains (1) summary
      pfam14144
      Location:46 → 104
      DOG1; Seed dormancy control
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O04515.1

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