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    PP2-B15 phloem protein 2-B15 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837435, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PP2-B15
    Official Full Name
    phloem protein 2-B15
    Primary source
    TAIR:AT1G09155
    Locus tag
    AT1G09155
    See related
    Araport:AT1G09155
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtPP2-B15; phloem protein 2-B15
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    Genomic context

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    See PP2-B15 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (2949621..2950989, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene SERINE-ARGININE PROTEIN 30 Neighboring gene pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein Neighboring gene transmembrane protein, putative (DUF679) Neighboring gene Protein phosphatase 2C family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Diversity of the superfamily of phloem lectins (phloem protein 2) in angiosperms. Dinant S, et al. Plant Physiol, 2003 Jan. PMID 12529520, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_100785.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbohydrate binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    phloem protein 2-B15
    NP_563837.1
    • phloem protein 2-B15 (PP2-B15); FUNCTIONS IN: carbohydrate binding; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: phloem protein 2-B13 (TAIR:AT1G56240.1); Has 535 Blast hits to 526 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 535; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2949621..2950989 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100785.3 → NP_563837.1  phloem protein 2-B15 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563837.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80494, Q8LBR0
      UniProtKB/TrEMBL
      A0A5S9TEY7, A0A654E9C3
      Conserved Domains (1) summary
      pfam14299
      Location:93 → 279
      PP2; Phloem protein 2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80494.2

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