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    SARA1A secretion-associated RAS super family 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837438, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SARA1A
    Official Full Name
    secretion-associated RAS super family 1
    Primary source
    TAIR:AT1G09180
    Locus tag
    AT1G09180
    See related
    Araport:AT1G09180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSAR1; ATSARA1A; SECRETION-ASSOCIATED RAS 1; secretion-associated RAS super family 1; T12M4.12; T12M4_12
    Summary
    A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.
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    Genomic context

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    See SARA1A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (2965023..2965972)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein Neighboring gene uncharacterized protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Ppx-GppA phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. COPII Components Sar1b and Sar1c Play Distinct Yet Interchangeable Roles in Pollen Development. Liang X, et al. Plant Physiol, 2020 Jul. PMID 32327549, Free PMC Article
    2. Analysis of the small GTPase gene superfamily of Arabidopsis. Vernoud V, et al. Plant Physiol, 2003 Mar. PMID 12644670, Free PMC Article
    3. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    4. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_100788.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within pollen development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    secretion-associated RAS super family 1
    NP_172390.1
    • secretion-associated RAS super family 1 (SARA1A); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: secretion-associated RAS 1B (TAIR:AT1G56330.1); Has 6779 Blast hits to 6777 proteins in 381 species: Archae - 2; Bacteria - 35; Metazoa - 3324; Fungi - 1254; Plants - 1081; Viruses - 0; Other Eukaryotes - 1083 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2965023..2965972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100788.3 → NP_172390.1  secretion-associated RAS super family 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172390.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9TDR2, A0A654E9N5, O80489
      Conserved Domains (1) summary
      cd00879
      Location:2 → 192
      Sar1; Sar1 is an essential component of COPII vesicle coats
    Nucleotide Protein
    Heading Accession and Version

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