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    Ccdc71l coiled-coil domain containing 71-like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 500640, updated on 9-Dec-2024

    Summary

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    Symbol
    Ccdc71lprovided by RGD
    Full Name
    coiled-coil domain containing 71-likeprovided by RGD
    Primary source
    RGD:1560812
    See related
    EnsemblRapid:ENSRNOG00000065519 AllianceGenome:RGD:1560812
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1560812
    Summary
    Orthologous to human CCDC71L (coiled-coil domain containing 71 like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See Ccdc71l in Genome Data Viewer
    Location:
    6q16
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (54687474..54691566)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (48960020..48964112)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (51659498..51666145)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene calmodulin 2, pseudogene 3 Neighboring gene U4 spliceosomal RNA Neighboring gene nuclear transport factor 2-like export factor 2, pseudogene 1 Neighboring gene uncharacterized LOC134479363

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 71L

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001399142.1 → NP_001386071.1  coiled-coil domain-containing protein 71L

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/TrEMBL
      F1M119
      Related
      ENSRNOP00000105063.1, ENSRNOT00000112336.2
      Conserved Domains (1) summary
      pfam15374
      Location:32 → 104
      CCDC71L; Coiled-coil domain-containing protein 71L

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      54687474..54691566
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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