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    PRS3 phosphoribosyl pyrophosphate (PRPP) synthase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837613, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PRS3
    Official Full Name
    phosphoribosyl pyrophosphate (PRPP) synthase 3
    Primary source
    TAIR:AT1G10700
    Locus tag
    AT1G10700
    See related
    Araport:AT1G10700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    phosphoribosyl pyrophosphate (PRPP) synthase 3; T16B5.16
    Summary
    Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase.
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    Genomic context

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    See PRS3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (3554104..3556544)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene cyclin-dependent kinase inhibitor Neighboring gene miscRNA Neighboring gene poor homologous synapsis 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001331922.1
    NM_100946.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ribose phosphate diphosphokinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    phosphoribosyl pyrophosphate (PRPP) synthase 3
    NP_172540.1
    • phosphoribosyl pyrophosphate (PRPP) synthase 3 (PRS3); FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: nucleotide biosynthetic process, nucleoside metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946); BEST Arabidopsis thaliana protein match is: Phosphoribosyltransferase family protein (TAIR:AT2G42910.1); Has 9536 Blast hits to 9535 proteins in 2732 species: Archae - 207; Bacteria - 5887; Metazoa - 527; Fungi - 344; Plants - 201; Viruses - 8; Other Eukaryotes - 2362 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3554104..3556544
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100946.3 → NP_172540.1  phosphoribosyl pyrophosphate (PRPP) synthase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172540.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93Z66, Q9SAD2, Q9SGY0, Q9XFR3
      UniProtKB/TrEMBL
      A0A178WKD5, A0A5S9TPP2
      Conserved Domains (2) summary
      PLN02297
      Location:85 → 411
      PLN02297; ribose-phosphate pyrophosphokinase
      cd06223
      Location:295 → 367
      PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain

    2. NM_001331922.1 → NP_001320728.1  phosphoribosyl pyrophosphate (PRPP) synthase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANQ1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93Z66.1

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