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    vacuolar fusion CCZ1-like protein (DUF1712) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844431, updated on 18-Sep-2024

    Summary

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    Official Full Name
    vacuolar fusion CCZ1-like protein (DUF1712)
    Primary source
    TAIR:AT1G80910
    Locus tag
    AT1G80910
    See related
    Araport:AT1G80910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CALCIUM CAFFEINE ZINC SENSITIVITY 1b; CCZ1b; F23A5.27; F23A5_27
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (30400631..30403726)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GAG1At protein Neighboring gene ncRNA Neighboring gene magnesium transporter 1 Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene MIF4G domain-containing protein / MA3 domain-containing protein Neighboring gene Snf1 kinase interactor-like protein Neighboring gene Phospholipid/glycerol acyltransferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MONENSIN SENSITIVITY1 (MON1)/CALCIUM CAFFEINE ZINC SENSITIVITY1 (CCZ1)-Mediated Rab7 Activation Regulates Tapetal Programmed Cell Death and Pollen Development. Cui Y, et al. Plant Physiol, 2017 Jan. PMID 27799422, Free PMC Article
    2. Activation of the Rab7 GTPase by the MON1-CCZ1 Complex Is Essential for PVC-to-Vacuole Trafficking and Plant Growth in Arabidopsis. Cui Y, et al. Plant Cell, 2014 May. PMID 24824487, Free PMC Article
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. MON1/CALCIUM CAFFEINE ZINC SENSITIVITY1 (CCZ1)-mediated Rab7 activation was indispensable for vacuolar trafficking of tapetum degradation-related cysteine proteases.
      Title: MONENSIN SENSITIVITY1 (MON1)/CALCIUM CAFFEINE ZINC SENSITIVITY1 (CCZ1)-Mediated Rab7 Activation Regulates Tapetal Programmed Cell Death and Pollen Development.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_106739.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of Mon1-Ccz1 complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    vacuolar fusion CCZ1-like protein (DUF1712)
    NP_178206.1
    • Protein of unknown function (DUF1712); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1712, fungi (InterPro:IPR013176); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1712) (TAIR:AT1G16020.2); Has 182 Blast hits to 182 proteins in 73 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      30400631..30403726
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106739.4 → NP_178206.1  vacuolar fusion CCZ1-like protein (DUF1712) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178206.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DGZ2, C0Z274, Q9SAG9
      UniProtKB/TrEMBL
      A0A7G2E7S2
      Conserved Domains (1) summary
      pfam08217
      Location:15 → 494
      DUF1712; Fungal domain of unknown function (DUF1712)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    C0Z274.1

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