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    akap17a A kinase (PRKA) anchor protein 17A [ Danio rerio (zebrafish) ]

    Gene ID: 393655, updated on 9-Dec-2024

    Summary

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    Official Symbol
    akap17aprovided by ZNC
    Official Full Name
    A kinase (PRKA) anchor protein 17Aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1460
    See related
    Ensembl:ENSDARG00000104768 AllianceGenome:ZFIN:ZDB-GENE-040426-1460
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:65888; zgc:77317
    Summary
    Predicted to enable RNA binding activity. Orthologous to human AKAP17A (A-kinase anchoring protein 17A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See akap17a in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (55748411..55772937, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (56398749..56423275, complement)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene si:ch211-39i22.1 Neighboring gene dehydrogenase/reductase SDR family member on chromosome X-like Neighboring gene acetylserotonin O-methyltransferase Neighboring gene sosondowah ankyrin repeat domain family Ca Neighboring gene septin 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC65888

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    A-kinase anchor protein 17A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200682.2 → NP_956976.2  A-kinase anchor protein 17A

      See identical proteins and their annotated locations for NP_956976.2

      Status: PROVISIONAL

      Source sequence(s)
      BC066673
      UniProtKB/TrEMBL
      Q6NYA9
      Related
      ENSDARP00000133964.1, ENSDART00000159192.3
      Conserved Domains (1) summary
      cd12264
      Location:141 → 263
      RRM_AKAP17A; RNA recognition motif found in A-kinase anchor protein 17A (AKAP-17A) and similar proteins

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      55748411..55772937 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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