shcbp1 SHC SH2-domain binding protein 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: shcbp1provided by ZNC
Official Full Name: SHC SH2-domain binding protein 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-5865
See related: Ensembl:ENSDARG00000102068 AllianceGenome:ZFIN:ZDB-GENE-030131-5865
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cb251; sb:cb251; zgc:66476; im:7145675; wu:fi22a03
Summary: Predicted to be involved in fibroblast growth factor receptor signaling pathway. Predicted to be located in cytoplasm and spindle. Is expressed in alar plate midbrain region; nervous system; optic vesicle; proliferative region; and yolk syncytial layer. Orthologous to human SHCBP1 (SHC binding and spindle associated 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (45828636..45852218, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (45556360..45579942, complement)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

AW153463 (e-PCR)
- UniSTS:205939

fi22a03.x1 (e-PCR)
- UniSTS:197032

fe50f10.x1 (e-PCR)
- UniSTS:196588

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in fibroblast growth factor receptor signaling pathway	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in spindle	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: SHC SH2 domain-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.