U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    znf800a zinc finger protein 800a [ Danio rerio (zebrafish) ]

    Gene ID: 568719, updated on 9-Dec-2024

    Summary

    Official Symbol
    znf800aprovided by ZNC
    Official Full Name
    zinc finger protein 800aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041008-151
    See related
    Ensembl:ENSDARG00000004594 AllianceGenome:ZFIN:ZDB-GENE-041008-151
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    znf800; im:7138362
    Summary
    Predicted to enable metal ion binding activity. Predicted to be located in nucleus. Orthologous to human ZNF800 (zinc finger protein 800). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See znf800a in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (26901149..26912188)
    105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (26457947..26468986)

    Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene si:dkey-42p14.3 Neighboring gene dihydrolipoamide dehydrogenase Neighboring gene glutamate receptor, metabotropic 8b Neighboring gene uncharacterized LOC137489368 Neighboring gene uncharacterized LOC110438395

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    zinc finger protein 800a
    Names
    zinc finger protein 800

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001324549.1NP_001311478.1  zinc finger protein 800a

      Status: VALIDATED

      Source sequence(s)
      CR376804
      UniProtKB/TrEMBL
      A0A8M6YVY6, F1QH89, X1WDC3
      Related
      ENSDARP00000128222.1, ENSDART00000153839.3

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007136.7 Reference GRCz11 Primary Assembly

      Range
      26901149..26912188
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017354092.3XP_017209581.1  zinc finger protein 800a isoform X1

      UniProtKB/TrEMBL
      A0A8M6YVY6, F1QH89, X1WDC3
      Related
      ENSDARP00000089079.4, ENSDART00000098307.5