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    znf185 zinc finger protein 185 with LIM domain [ Danio rerio (zebrafish) ]

    Gene ID: 553349, updated on 9-Dec-2024

    Summary

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    Official Symbol
    znf185provided by ZNC
    Official Full Name
    zinc finger protein 185 with LIM domainprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-061103-355
    See related
    Ensembl:ENSDARG00000103917 AllianceGenome:ZFIN:ZDB-GENE-061103-355
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fd02a11; zgc:152778
    Summary
    Predicted to enable metal ion binding activity. Is expressed in EVL. Orthologous to human ZNF185 (zinc finger protein 185 with LIM domain). [provided by Alliance of Genome Resources, Dec 2024]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    all
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    Genomic context

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    See znf185 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (14622944..14643176, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (14317381..14337613, complement)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene proteolipid protein 1a Neighboring gene RAB9B, member RAS oncogene family Neighboring gene fucosyltransferase 11 (alpha (1,3) fucosyltransferase) Neighboring gene NAD(P) dependent steroid dehydrogenase-like Neighboring gene centrin, EF-hand protein, 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Knockdown of Tmem234 in zebrafish results in proteinuria. Rodriguez PQ, et al. Am J Physiol Renal Physiol, 2015 Dec 1. PMID 26377798
    2. Pre-gastrula expression of zebrafish extraembryonic genes. Hong SK, et al. BMC Dev Biol, 2010 Apr 27. PMID 20423468, Free PMC Article
    3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger protein 185
    Names
    zinc finger protein 185 (LIM domain)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077536.1 → NP_001071004.1  zinc finger protein 185

      See identical proteins and their annotated locations for NP_001071004.1

      Status: PROVISIONAL

      Source sequence(s)
      BC125817
      UniProtKB/TrEMBL
      A0JMB8
      Related
      ENSDARP00000135416.1, ENSDART00000167119.2
      Conserved Domains (1) summary
      smart00132
      Location:1032 → 1087
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      14622944..14643176 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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