wdr83 WD repeat domain containing 83 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: wdr83provided by ZNC
Official Full Name: WD repeat domain containing 83provided by ZNC
Primary source: ZFIN:ZDB-GENE-040718-126
See related: Ensembl:ENSDARG00000041600 AllianceGenome:ZFIN:ZDB-GENE-040718-126
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: morg1; fj29g04; zgc:92654; wu:fj29g04
Summary: Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in cytoplasm. Predicted to be part of catalytic step 2 spliceosome. Is expressed in lens and solid lens vesicle. Orthologous to human WDR83 (WD repeat domain 83). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 22

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	22	NC_007133.7 (26264543..26274177, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	22	NC_007133.6 (26244646..26254280, complement)

Chromosome 22 - NC_007133.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in mRNA splicing, via spliceosome	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of catalytic step 2 spliceosome	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: WD repeat domain-containing protein 83

Names: MAPK organizer 1; mitogen-activated protein kinase organizer 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001002429.1 → NP_001002429.1 WD repeat domain-containing protein 83

See identical proteins and their annotated locations for NP_001002429.1

Status: PROVISIONAL

Source sequence(s)

BC076138

UniProtKB/Swiss-Prot

Q6DH44

Related

ENSDARP00000060977.2, ENSDART00000060978.3

Conserved Domains (3) summary

COG2319
Location:17 → 303

WD40; WD40 repeat [General function prediction only]

cd00200
Location:19 → 303

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

sd00039
Location:30 → 65

7WD40; WD40 repeat [structural motif]