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    pde9aa phosphodiesterase 9aa [ Danio rerio (zebrafish) ]

    Gene ID: 799942, updated on 9-Dec-2024

    Summary

    Official Symbol
    pde9aaprovided by ZNC
    Official Full Name
    phosphodiesterase 9aaprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-130920-1
    See related
    Ensembl:ENSDARG00000060280 AllianceGenome:ZFIN:ZDB-GENE-130920-1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    pde9a; si:ch211-140m22.4
    Summary
    Predicted to enable 3',5'-cyclic-AMP phosphodiesterase activity and 3',5'-cyclic-GMP phosphodiesterase activity. Predicted to be involved in cAMP-mediated signaling and cGMP catabolic process. Predicted to act upstream of or within signal transduction. Is expressed in several structures, including heart; integument; liver; nervous system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in congestive heart failure. Orthologous to human PDE9A (phosphodiesterase 9A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See pde9aa in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (19421673..19477253)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (19610789..19666390)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene zgc:152951 Neighboring gene solute carrier family 37 member 1 Neighboring gene si:ch211-140m22.7 Neighboring gene WD repeat domain 4 Neighboring gene NADH:ubiquinone oxidoreductase subunit V3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables 3',5'-cyclic-AMP phosphodiesterase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables 3',5'-cyclic-GMP phosphodiesterase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphoric diester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cAMP-mediated signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cGMP catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within signal transduction IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
    Names
    phosphodiesterase 9A
    XP_009302928.1
    XP_021334564.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      19421673..19477253
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009304653.4XP_009302928.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

      See identical proteins and their annotated locations for XP_009302928.1

      UniProtKB/TrEMBL
      A0A8M3AW03, F1R112
      Related
      ENSDARP00000079206.5, ENSDART00000084771.6
      Conserved Domains (1) summary
      pfam00233
      Location:242472
      PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    2. XM_021478889.2XP_021334564.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

      UniProtKB/TrEMBL
      A0A8M9QB87
      Conserved Domains (1) summary
      pfam00233
      Location:122350
      PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase