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    irgq1 immunity-related GTPase family, q1 [ Danio rerio (zebrafish) ]

    Gene ID: 565312, updated on 9-Dec-2024

    Summary

    Official Symbol
    irgq1provided by ZNC
    Official Full Name
    immunity-related GTPase family, q1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-051212-3
    See related
    Ensembl:ENSDARG00000086847 AllianceGenome:ZFIN:ZDB-GENE-051212-3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable GTP binding activity. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See irgq1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (25806408..25812946)
    105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (25891373..25897015)

    Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene BCL3 transcription coactivator Neighboring gene uncharacterized LOC137487904 Neighboring gene Cbl proto-oncogene C, E3 ubiquitin protein ligase Neighboring gene uncharacterized LOC103908931 Neighboring gene interferon-inducible GTPase 5-like Neighboring gene immunity-related GTPase family, e4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    interferon gamma induced GTPase; uncharacterized protein irgq1
    Names
    immunity-related GTPase family, cinema 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007127.7 Reference GRCz11 Primary Assembly

      Range
      25806408..25812946
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_688591.9XP_693683.6  uncharacterized protein irgq1

      UniProtKB/TrEMBL
      A0A8N7UR59, X1WE34
      Related
      ENSDARP00000128485.1, ENSDART00000154652.2