zgc:152951 zgc:152951 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:152951provided by ZNC
Official Full Name: zgc:152951provided by ZNC
Primary source: ZFIN:ZDB-GENE-060929-416
See related: Ensembl:ENSDARG00000068663 AllianceGenome:ZFIN:ZDB-GENE-060929-416
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs: all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 9

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (19339769..19366543, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (19332176..19358822, complement)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

Go to the top of the page Help

Preferred Names: uncharacterized protein LOC569013

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001077176.1 → NP_001070644.1 uncharacterized protein LOC569013

See identical proteins and their annotated locations for NP_001070644.1

Status: PREDICTED

Source sequence(s)

BC124189

UniProtKB/TrEMBL

Q08CL2

Related

ENSDARP00000115077.1, ENSDART00000138431.3

Conserved Domains (2) summary

pfam04784
Location:168 → 296

DUF547; Protein of unknown function, DUF547

cl00388
Location:10 → 82

Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007120.7 Reference GRCz11 Primary Assembly

Range

19339769..19366543 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_005167957.5 → XP_005168014.1 uncharacterized protein LOC569013 isoform X1

UniProtKB/TrEMBL

A0A8M2BG15

Conserved Domains (2) summary

cd03027
Location:10 → 82

GRX_DEP; Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) ...

pfam04784
Location:169 → 297

DUF547; Protein of unknown function, DUF547