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    klhdc10 kelch domain containing 10 [ Danio rerio (zebrafish) ]

    Gene ID: 393231, updated on 9-Dec-2024

    Summary

    Official Symbol
    klhdc10provided by ZNC
    Official Full Name
    kelch domain containing 10provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-776
    See related
    Ensembl:ENSDARG00000007764 AllianceGenome:ZFIN:ZDB-GENE-040426-776
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:55663
    Summary
    Predicted to be involved in positive regulation of stress-activated MAPK cascade. Predicted to be located in membrane. Orthologous to human KLHDC10 (kelch domain containing 10). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See klhdc10 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (14990931..15003893, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (14992176..15005179, complement)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene smoothened, frizzled class receptor Neighboring gene cation/H+ exchanger protein 1 Neighboring gene zinc finger, C3HC-type containing 1 Neighboring gene ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    kelch domain-containing protein 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200261.1NP_956555.1  kelch domain-containing protein 10

      See identical proteins and their annotated locations for NP_956555.1

      Status: PROVISIONAL

      Source sequence(s)
      BC048880
      UniProtKB/TrEMBL
      A0A8N1TYD5, Q7ZUL3
      Related
      ENSDARP00000021554.5, ENSDART00000002401.7
      Conserved Domains (4) summary
      PLN02153
      Location:36347
      PLN02153; epithiospecifier protein
      sd00038
      Location:159207
      Kelch; KELCH repeat [structural motif]
      pfam01344
      Location:266308
      Kelch_1; Kelch motif
      pfam13418
      Location:4295
      Kelch_4; Galactose oxidase, central domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      14990931..15003893 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005164695.5XP_005164752.1  kelch domain-containing protein 10 isoform X1

      UniProtKB/TrEMBL
      A0A8M2BBZ4
      Conserved Domains (4) summary
      PLN02153
      Location:65378
      PLN02153; epithiospecifier protein
      sd00038
      Location:190238
      Kelch; KELCH repeat [structural motif]
      pfam01344
      Location:297339
      Kelch_1; Kelch motif
      pfam13418
      Location:73126
      Kelch_4; Galactose oxidase, central domain

    RNA

    1. XR_011010877.1 RNA Sequence