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    fam8a1b family with sequence similarity 8 member A1b [ Danio rerio (zebrafish) ]

    Gene ID: 548347, updated on 4-Jan-2025

    Summary

    Official Symbol
    fam8a1bprovided by ZNC
    Official Full Name
    family with sequence similarity 8 member A1bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050410-14
    See related
    Ensembl:ENSDARG00000004308 AllianceGenome:ZFIN:ZDB-GENE-050410-14
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fam8a1; fc56e03; wu:fc56e03; zgc:113480
    Summary
    Predicted to be located in membrane. Orthologous to human FAM8A1 (family with sequence similarity 8 member A1). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    NEW
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    Genomic context

    See fam8a1b in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (25593339..25597869, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (25678307..25682837, complement)

    Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene myosin regulatory light chain interacting protein b Neighboring gene uncharacterized LOC137487906 Neighboring gene ataxin 1b Neighboring gene zgc:110410 Neighboring gene zinc fingers and homeoboxes 2a Neighboring gene derlin 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC158543

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC548347
    Names
    family with sequence similarity 8, member A1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017551.2NP_001017551.1  uncharacterized protein LOC548347

      See identical proteins and their annotated locations for NP_001017551.1

      Status: PREDICTED

      Source sequence(s)
      BC092164
      UniProtKB/TrEMBL
      Q56A52
      Related
      ENSDARP00000002079.8, ENSDART00000021533.9
      Conserved Domains (1) summary
      pfam06271
      Location:157316
      RDD; RDD family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007127.7 Reference GRCz11 Primary Assembly

      Range
      25593339..25597869 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)