si:dkeyp-38g8.5 si:dkeyp-38g8.5 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: si:dkeyp-38g8.5provided by ZNC
Official Full Name: si:dkeyp-38g8.5provided by ZNC
Primary source: ZFIN:ZDB-GENE-081104-62
See related: Ensembl:ENSDARG00000056954 AllianceGenome:ZFIN:ZDB-GENE-081104-62
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to be involved in cytoplasmic sequestering of protein. Predicted to be active in cytoskeleton. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

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Location:: chromosome: 4

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	4	NC_007115.7 (16315692..16319762)
105	previous assembly	GRCz10 (GCF_000002035.5)	4	NC_007115.6 (16326716..16330786)

Chromosome 4 - NC_007115.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in cytoplasmic sequestering of protein	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoskeleton	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: uncharacterized protein LOC568385

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001123290.1 → NP_001116762.1 uncharacterized protein LOC568385

Status: PREDICTED

Source sequence(s)

BX322608

UniProtKB/TrEMBL

A0A8M1NGS0, B0S5X1

Related

ENSDARP00000050406.6, ENSDART00000050407.7

Conserved Domains (2) summary

pfam13837
Location:43 → 122

Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain

cl19107
Location:198 → 289

SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily