U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    mrps24 mitochondrial ribosomal protein S24 [ Danio rerio (zebrafish) ]

    Gene ID: 553711, updated on 9-Dec-2024

    Summary

    Official Symbol
    mrps24provided by ZNC
    Official Full Name
    mitochondrial ribosomal protein S24provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050522-393
    See related
    Ensembl:ENSDARG00000100116 AllianceGenome:ZFIN:ZDB-GENE-050522-393
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:112331
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Orthologous to human MRPS24 (mitochondrial ribosomal protein S24). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See mrps24 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (45053577..45058862, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (45206965..45212250, complement)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene polymerase (DNA directed), mu Neighboring gene glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b Neighboring gene NudC domain containing 3 Neighboring gene calcium/calmodulin-dependent protein kinase type II subunit beta

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC112331

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in mitochondrial translation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    small ribosomal subunit protein uS3m
    Names
    28S ribosomal protein S24, mitochondrial
    MRP-S24
    S24mt
    NP_001018518.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001020682.2NP_001018518.1  small ribosomal subunit protein uS3m precursor

      See identical proteins and their annotated locations for NP_001018518.1

      Status: VALIDATED

      Source sequence(s)
      CR383667
      UniProtKB/Swiss-Prot
      Q502C1
      Related
      ENSDARP00000134058.1, ENSDART00000159347.2
      Conserved Domains (1) summary
      pfam14955
      Location:32163
      MRP-S24; Mitochondrial ribosome subunit S24

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      45053577..45058862 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)