rsph14 radial spoke head 14 homolog [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rsph14provided by ZNC
Official Full Name: radial spoke head 14 homologprovided by ZNC
Primary source: ZFIN:ZDB-GENE-081104-375
See related: Ensembl:ENSDARG00000017983 AllianceGenome:ZFIN:ZDB-GENE-081104-375
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: rtdr1; si:dkey-220o5.4
Summary: Predicted to be involved in animal organ development. Orthologous to human RSPH14 (radial spoke head 14 homolog). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 8

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	8	NC_007119.7 (44566702..44586984, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	8	NC_007119.6 (44572624..44593078, complement)

Chromosome 8 - NC_007119.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in animal organ development	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: radial spoke head 14 homolog

Names: rhabdoid tumor deletion region gene 1; rhabdoid tumor deletion region protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001327866.1 → NP_001314795.1 radial spoke head 14 homolog

Status: VALIDATED

Source sequence(s)

CR931937

UniProtKB/TrEMBL

A0A8M1P3V2, B8JJ19

Related

ENSDARP00000023459.8, ENSDART00000026831.10

Conserved Domains (3) summary

cd00020
Location:186 → 299

ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...

sd00044
Location:151 → 175

HEAT; HEAT repeat [structural motif]

cl22454
Location:268 → 340

ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...