aldh16a1 aldehyde dehydrogenase 16 family, member A1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: aldh16a1provided by ZNC
Official Full Name: aldehyde dehydrogenase 16 family, member A1provided by ZNC
Primary source: ZFIN:ZDB-GENE-070112-2062
See related: Ensembl:ENSDARG00000037935 AllianceGenome:ZFIN:ZDB-GENE-070112-2062
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: im:7151472; zgc:158277
Summary: Predicted to enable oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor. Is expressed in several structures, including intermediate cell mass of mesoderm; liver; neural tube; spinal cord; and vasculature. Orthologous to human ALDH16A1 (aldehyde dehydrogenase 16 family member A1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 16

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	3	NC_007114.7 (32080359..32098537)
105	previous assembly	GRCz10 (GCF_000002035.5)	3	NC_007114.6 (31948626..31966823)

Chromosome 3 - NC_007114.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables aldehyde dehydrogenase (NAD+) activity	IBA Inferred from Biological aspect of Ancestor more info
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: aldehyde dehydrogenase family 16 member A1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001079954.2 → NP_001073423.2 aldehyde dehydrogenase family 16 member A1

Status: VALIDATED

Source sequence(s)

BX511080

UniProtKB/TrEMBL

A0A8N1TQ55, F1QGP1

Related

ENSDARP00000111827.2, ENSDART00000124943.3

Conserved Domains (2) summary

COG1012
Location:514 → 755

AdhE; Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase [Energy production and conversion]

cl11961
Location:18 → 470

ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007114.7 Reference GRCz11 Primary Assembly

Range

32080359..32098537

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_005164021.5 → XP_005164078.1 aldehyde dehydrogenase family 16 member A1 isoform X1

UniProtKB/TrEMBL

A0A8M2BBC0

Conserved Domains (2) summary

COG1012
Location:513 → 754

AdhE; Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase [Energy production and conversion]

cl11961
Location:18 → 469

ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily