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    tcta T cell leukemia translocation altered [ Danio rerio (zebrafish) ]

    Gene ID: 436858, updated on 9-Dec-2024

    Summary

    Official Symbol
    tctaprovided by ZNC
    Official Full Name
    T cell leukemia translocation alteredprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-325
    See related
    Ensembl:ENSDARG00000044194 AllianceGenome:ZFIN:ZDB-GENE-040718-325
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:92721; wu:fb06g04
    Summary
    Predicted to be involved in osteoclast fusion. Predicted to be located in membrane. Orthologous to human TCTA (T cell leukemia translocation altered). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See tcta in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (43015916..43019222)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (43018380..43021686)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 Neighboring gene si:ch73-361p23.3 Neighboring gene tumor necrosis factor receptor superfamily, member 18 Neighboring gene glycerate kinase Neighboring gene leucine rich repeat neuronal 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in osteoclast fusion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    T-cell leukemia translocation-altered gene protein homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002585.2NP_001002585.1  T-cell leukemia translocation-altered gene protein homolog

      See identical proteins and their annotated locations for NP_001002585.1

      Status: VALIDATED

      Source sequence(s)
      CT633277, CU856681, EH556465
      UniProtKB/Swiss-Prot
      Q6DGY3
      Related
      ENSDARP00000064887.4, ENSDART00000064888.5
      Conserved Domains (1) summary
      pfam15128
      Location:11100
      T_cell_tran_alt; T-cell leukemia translocation-altered

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      43015916..43019222
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)