eef1b2 eukaryotic translation elongation factor 1 beta 2 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: eef1b2provided by ZNC
Official Full Name: eukaryotic translation elongation factor 1 beta 2provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-7310
See related: Ensembl:ENSDARG00000044521 AllianceGenome:ZFIN:ZDB-GENE-030131-7310
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fj06d02; zgc:56277; zgc:86802; wu:fj06d02
Summary: Predicted to enable translation elongation factor activity. Predicted to act upstream of or within translational elongation. Predicted to be part of eukaryotic translation elongation factor 1 complex. Orthologous to several human genes including ZDBF2 (zinc finger DBF-type containing 2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (13201010..13206255, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (12967475..12972720, complement)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables translation elongation factor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within translation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within translational elongation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of eukaryotic translation elongation factor 1 complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: elongation factor 1-beta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_199949.2 → NP_956243.1 elongation factor 1-beta

See identical proteins and their annotated locations for NP_956243.1

Status: PROVISIONAL

Source sequence(s)

AY398339

UniProtKB/TrEMBL

Q7ZV16

Related

ENSDARP00000065372.4, ENSDART00000065373.5

Conserved Domains (2) summary

cd10308
Location:3 → 62

GST_C_eEF1b_like; Glutathione S-transferase C-terminal-like, alpha helical domain of eukaryotic translation Elongation Factor 1 beta

pfam00736
Location:142 → 225

EF1_GNE; EF-1 guanine nucleotide exchange domain