U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    REM1 Transcriptional factor B3 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829288, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    REM1
    Official Full Name
    Transcriptional factor B3 family protein
    Primary source
    TAIR:AT4G31610
    Locus tag
    AT4G31610
    See related
    Araport:AT4G31610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATREM1; F28M20.200; F28M20_200; REM34; REPRODUCTIVE MERISTEM 1; reproductive meristem 34
    Summary
    Expressed specifically in reproductive meristems, member of a moderately sized gene family distantly related to known plant DNA binding proteins
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See REM1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (15317499..15320046)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Cellulose-synthase-like C5 Neighboring gene UDP-N-acetylglucosamine (UAA) transporter family Neighboring gene Transcriptional factor B3 family protein Neighboring gene Transcriptional factor B3 family protein Neighboring gene Transcriptional factor B3 family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. AtREM1, a member of a new family of B3 domain-containing genes, is preferentially expressed in reproductive meristems. Franco-Zorrilla JM, et al. Plant Physiol, 2002 Feb. PMID 11842146, Free PMC Article
    2. Assessing the role of REM13, REM34 and REM46 during the transition to the reproductive phase in Arabidopsis thaliana. Manrique S, et al. Plant Mol Biol, 2023 Jun. PMID 37171544, Free PMC Article
    3. REM34 and REM35 Control Female and Male Gametophyte Development in Arabidopsis thaliana. Caselli F, et al. Front Plant Sci, 2019. PMID 31708954, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Assessing the role of REM13, REM34 and REM46 during the transition to the reproductive phase in Arabidopsis thaliana.
      Title: Assessing the role of REM13, REM34 and REM46 during the transition to the reproductive phase in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

    Go to the top of the page Help

    Homology

    NM_001342099.1
    NM_119310.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in flower development IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within megagametogenesis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Transcriptional factor B3 family protein
    NP_567880.1
    • REPRODUCTIVE MERISTEM 1 (REM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Transcriptional factor B3 family protein (TAIR:AT4G31630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15317499..15320046
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119310.4 → NP_567880.1  Transcriptional factor B3 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567880.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84J39, Q9ATC8, Q9SB77
      UniProtKB/TrEMBL
      A0A178UW35, A0A5S9XZV5, A0A654FUP7, A0A7G2F2G1
      Conserved Domains (1) summary
      smart01019
      Location:162 → 257
      B3; B3 DNA binding domain

    2. NM_001342099.1 → NP_001328023.1  Transcriptional factor B3 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B3F5, A0A654FUP7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q84J39.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.