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    CHX27 cation/H+ exchanger 27 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830460, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CHX27
    Official Full Name
    cation/H+ exchanger 27
    Primary source
    TAIR:AT5G01690
    Locus tag
    AT5G01690
    See related
    Araport:AT5G01690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA CATION/HYDROGEN EXCHANGER 27; ATCHX27; cation/H+ exchanger 27; F7A7.210; F7A7_210
    Summary
    member of Putative Na+/H+ antiporter family
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    Genomic context

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    See CHX27 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (257306..260490)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene cation/H+ exchanger 26 Neighboring gene Protein phosphatase 2C family protein Neighboring gene methyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables sodium:proton antiporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cation/H+ exchanger 27
    NP_001318455.1
    • cation/H+ exchanger 27 (CHX27); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 26 (TAIR:AT5G01680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      257306..260490
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342606.1 → NP_001318455.1  cation/H+ exchanger 27 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4K9H0, Q9M007
      UniProtKB/TrEMBL
      A0A178UD66, A0A5S9Y1B8
      Conserved Domains (1) summary
      PLN03159
      Location:27 → 767
      PLN03159; cation/H(+) antiporter 15; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M007.2

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