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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001395556.1 → NP_001382485.1 ATP-dependent RNA helicase A
Status: VALIDATED
- Source sequence(s)
-
JAXUCZ010000013
- UniProtKB/TrEMBL
- A0A8I6ABZ7, A6ICV0, D4A9D6
- Related
- ENSRNOP00000090956.1, ENSRNOT00000116976.2
- Conserved Domains (4) summary
-
- COG1643
Location:337 → 1055
- HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
- cd17972
Location:333 → 566
- DEXHc_DHX9; DEXH-box helicase domain of DEAH-box helicase 9
- cd19854
Location:3 → 71
- DSRM_DHX9_rpt1; first double-stranded RNA binding motif of DEAH box protein 9 (DHX9) and similar proteins
- cd19855
Location:181 → 255
- DSRM_DHX9_rpt2; second double-stranded RNA binding motif of DEAH box protein 9 (DHX9) and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086031.1 Reference GRCr8
- Range
-
68152813..68189580 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006249996.5 → XP_006250058.1 ATP-dependent RNA helicase A isoform X1
- UniProtKB/TrEMBL
- A6ICV0, D4A9D6
- Related
- ENSRNOP00000061368.2, ENSRNOT00000064860.3
- Conserved Domains (6) summary
-
- smart00358
Location:5 → 69
- DSRM; Double-stranded RNA binding motif
- smart00487
Location:384 → 571
- DEXDc; DEAD-like helicases superfamily
- smart00847
Location:840 → 921
- HA2; Helicase associated domain (HA2) Add an annotation
- cd00046
Location:407 → 548
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam00271
Location:637 → 770
- Helicase_C; Helicase conserved C-terminal domain
- pfam07717
Location:961 → 1075
- OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
-
XM_008769633.3 → XP_008767855.1 ATP-dependent RNA helicase A isoform X2
- UniProtKB/TrEMBL
- A6ICV0, D4A9D6
- Conserved Domains (5) summary
-
- smart00487
Location:168 → 355
- DEXDc; DEAD-like helicases superfamily
- smart00847
Location:624 → 705
- HA2; Helicase associated domain (HA2) Add an annotation
- cd00046
Location:191 → 332
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam00271
Location:421 → 554
- Helicase_C; Helicase conserved C-terminal domain
- pfam07717
Location:745 → 859
- OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001107184.1: Suppressed sequence
- Description
- NM_001107184.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.