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    PRIN2 Serine/Threonine-kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837593, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PRIN2
    Official Full Name
    Serine/Threonine-kinase
    Primary source
    TAIR:AT1G10522
    Locus tag
    AT1G10522
    See related
    Araport:AT1G10522
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    PLASTID REDOX INSENSITIVE 2
    Summary
    Encodes PRIN2 (plastid redox insensitive 2). PRIN2 mutants are impaired in PEP (plastid-encoded RNA polymerase) activity and high light-dependent plastid redox signalling to the nucleus.
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    Genomic context

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    See PRIN2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (3469512..3471488)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RNI-like superfamily protein Neighboring gene DNA polymerase lambda (POLL) Neighboring gene ncRNA Neighboring gene D-ribose-binding periplasmic protein Neighboring gene ncRNA Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The plastid redox insensitive 2 mutant of Arabidopsis is impaired in PEP activity and high light-dependent plastid redox signalling to the nucleus. Kindgren P, et al. Plant J, 2012 Apr. PMID 22211401
    2. Redox regulation of PEP activity during seedling establishment in Arabidopsis thaliana. Díaz MG, et al. Nat Commun, 2018 Jan 3. PMID 29298981, Free PMC Article
    3. Plastid encoded RNA polymerase activity and expression of photosynthesis genes required for embryo and seed development in Arabidopsis. Kremnev D, et al. Front Plant Sci, 2014. PMID 25161659, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001084033.2
    NM_100927.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to light intensity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plastid nucleoid IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of plastid-encoded plastid RNA polymerase complex IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Serine/Threonine-kinase
    NP_001077502.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_563872.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3469512..3471488
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100927.4 → NP_563872.1  Serine/Threonine-kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563872.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9XIK0
      UniProtKB/TrEMBL
      A0A178WMK0, A0A5S9TNM7

    2. NM_001084033.2 → NP_001077502.1  Serine/Threonine-kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077502.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9XIK0
      UniProtKB/TrEMBL
      A0A178WMK0, A0A5S9TNM7
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9XIK0.1

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