U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    BLT branchless trichome [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842777, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    BLT
    Official Full Name
    branchless trichome
    Primary source
    TAIR:AT1G64690
    Locus tag
    AT1G64690
    See related
    Araport:AT1G64690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    BRANCHLESS TRICHOME; BRANCHLESS TRICHOMES; F13O11.1; F13O11_1
    Summary
    Encodes BRANCHLESS TRICHOME (BLT) involved in trichome development. A large portion of the internal amino acid sequence of BLT is predicted to form a coiled-coil domain. BLT mutants form branchless trichomes with blunt tips.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See BLT in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (24037475..24039177)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene methionine gamma-lyase Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene beta-carotene isomerase D27 Neighboring gene DUF4228 domain protein Neighboring gene GroES-like zinc-binding alcohol dehydrogenase family protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. BRANCHLESS TRICHOMES links cell shape and cell cycle control in Arabidopsis trichomes. Kasili R, et al. Development, 2011 Jun. PMID 21558384, Free PMC Article
    2. Transcriptome analysis of Arabidopsis wild-type and gl3-sst sim trichomes identifies four additional genes required for trichome development. Marks MD, et al. Mol Plant, 2009 Jul. PMID 19626137, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    NM_001334176.1
    NM_105144.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in trichome branching IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within trichome morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    branchless trichome
    NP_176650.1
    • BRANCHLESS TRICHOME (BLT); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50660.1); Has 8499 Blast hits to 5324 proteins in 475 species: Archae - 37; Bacteria - 382; Metazoa - 3924; Fungi - 509; Plants - 391; Viruses - 45; Other Eukaryotes - 3211 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24037475..24039177
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334174.1 → NP_001321642.1  branchless trichome [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I878, Q6NPD3, Q9XIS2
      UniProtKB/TrEMBL
      A0A178WF02

    2. NM_001334175.1 → NP_001321643.1  branchless trichome [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARI7, A0A5S9WRZ1

    3. NM_105144.4 → NP_176650.1  branchless trichome [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176650.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I878, Q6NPD3, Q9XIS2
      UniProtKB/TrEMBL
      A0A178WF02

    4. NM_001334176.1 → NP_001321644.1  branchless trichome [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARL0, A0A5S9WRZ1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4I878.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.