UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: UDP-Glycosyltransferase superfamily protein
Primary source: TAIR:AT1G06000
Locus tag: AT1G06000
See related: Araport:AT1G06000
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: T21E18.5; T21E18_5
Summary: encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 1

Exon count:: 1

Sequence:: Chromosome: 1; NC_003070.9 (1820308..1821894, complement)

Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Several rol1-2 suppressor mutants of the 7-O-rhamnosyltransferase locus UGT89C1 were identified. Levels of auxin conjugates and catabolites are strongly increased in the ugt89c1 mutant background.
Title: 7-Rhamnosylated Flavonols Modulate Homeostasis of the Plant Hormone Auxin and Affect Plant Development.

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_100480.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables UDP-glycosyltransferase activity	IDA Inferred from Direct Assay more info	PubMed
enables glycosyltransferase activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within flavonol biosynthetic process	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in cytosol	HDA more info	PubMed
located_in extracellular region	HDA more info	PubMed

General protein information

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Preferred Names: UDP-Glycosyltransferase superfamily protein

NP_563756.1

UDP-Glycosyltransferase superfamily protein; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 89B1 (TAIR:AT1G73880.1); Has 5632 Blast hits to 5556 proteins in 323 species: Archae - 0; Bacteria - 151; Metazoa - 482; Fungi - 23; Plants - 4909; Viruses - 43; Other Eukaryotes - 24 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003070.9 Reference assembly

Range

1820308..1821894 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_100480.3 → NP_563756.1 UDP-Glycosyltransferase superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_563756.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q0WWJ0, Q8LGD9, Q9LNE6

UniProtKB/TrEMBL

A0A178WBB2, A0A5S9SVT2, W8PVE7

Conserved Domains (1) summary

cl10013
Location:8 → 430

Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology