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    ARP4A actin-related proteins 4A [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843728, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARP4A
    Official Full Name
    actin-related proteins 4A
    Primary source
    TAIR:AT1G73910
    Locus tag
    AT1G73910
    See related
    Araport:AT1G73910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    actin-related proteins 4A; ATARP4A; F2P9.22; F2P9_22
    Summary
    Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation.
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    Genomic context

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    See ARP4A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (27789208..27790678)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene tRNA-Asp Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene polarity axis stabilization protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    actin-related proteins 4A
    NP_177531.1
    • actin-related proteins 4A (ARP4A); CONTAINS InterPro DOMAIN/s: Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: actin-related protein 4 (TAIR:AT1G18450.1); Has 8295 Blast hits to 8286 proteins in 1571 species: Archae - 0; Bacteria - 4; Metazoa - 4071; Fungi - 1608; Plants - 922; Viruses - 2; Other Eukaryotes - 1688 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27789208..27790678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106050.2 → NP_177531.1  actin-related proteins 4A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177531.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LKR1, Q9C9B2
      UniProtKB/TrEMBL
      A0A178W627
      Conserved Domains (1) summary
      cl17037
      Location:5 → 142
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

    2. NM_001334612.1 → NP_001323057.1  actin-related proteins 4A [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LKR1, Q9C9B2
      UniProtKB/TrEMBL
      A0A178W627

    3. NM_001334613.1 → NP_001323058.1  actin-related proteins 4A [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AVW4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C9B2.1

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